Publications

Some of my publications are also listed at DBLP and PubMed.

Books

  1. Walleij, L., Copyright existiert nicht (translated by Böhm, A. M.), 3-9412870-1-X, CSW-Verlag Winnenden, 2011
  2. Böhm, A. M., Methoden zur effizienten Proteinidentifizierung anhand von Massenspektrometrie, ISBN 3-8325-1402-3, Logos Verlag Berlin, 2006
  3. Böhm, A. M., Jungkunz, J., Grundkurs IT-Berufe, ISBN 3-528-05913-3, Friedr. Vieweg & Sohn Verlag / GWV Fachverlage GmbH, 2005

Patents

  1. Vorrichtung zur Simulation von Bewegungszuständen an Gelenken des tierischen und menschlichen Körpers, German Patent No. DE 19856913.

Selected Scientific Publications

  1. Puetz, S. M., Boehm, A. M., Stiewe, T., Sickmann, A., iTRAQ analysis of a cell culture model for malignant transformation, including comparison with 2D-PAGE and SILAC, Journal of Proteome Research, 2012, 11(4): 2140–2153. DOI 10.1021/pr200881c
  2. Muth, T., Keller, D., Puetz, S. M., Martens, L., Sickmann, A., Boehm, A. M., jTraqX: a Free, Platform Independent Tool for Isobaric Tag Quantitation at the Protein Level, Proteomics, 2010, 10(6): 1223-1225. DOI 10.1002/pmic.200900374
  3. Boehm, A. M., Seipel, D., Sickmann, A., Wetzka, M., Squash: A Tool for Analyzing, Tuning and Refactoring Relational Database Applications, in: Seipel, D., Hanus, M., Wolf, A., Applications of Declarative Programming and Knowledge Management, LNAI Vol. 5437, Springer, Berlin, 2009: 82-98. DOI 10.1007/978-3-642-00675-3_6
  4. Boehm, A. M., Altenhöfer, D., Pütz, S., Precise and Statistically Sound Protein Quantification in Mass Spectrometry Based Proteomics Using iTRAQ, in: Küng, J., Schneider, K., Wagner, R., 2nd International Conference on Bioinformatics Research and Development (BIRD'08), Schriftenreihe Informatik, 26, Trauner Verlag, Linz, 2008, 3-12
  5. Boehm, A. M., Altenhofer, D., Puetz, S. Precise protein quantification based on peptide quantification using iTRAQ, BMC Bioinformatics, 2007, 8:214. DOI 10.1186/1471-2105-8-214
  6. Boehm, A. M., Puetz, S., Altenhofer, D., Sickmann, A., Falk, M., Precise protein quantification based on peptide quantification using iTRAQ, BMC Bioinformatics, 2007, 8:214. DOI 10.1186/1471-2105-8-214
  7. Boehm, A. M., Sickmann, A., A Comprehensive Dictionary of Protein Accession Codes for Complete Protein Accession Identifier Alias Resolving. Proteomics, 2006, 6(15): 4223-4226. DOI 10.1002/pmic.200600018
  8. Zahedi, R. P., Sickmann, A., Boehm, A. M., Winkler, C., Zufall, N., Schönfisch, N., Guiard, B., Pfanner, N., Meisinger, C., Proteomic Analysis of the Yeast Mitochondrial Outer Membrane Reveals Accumulation of a Subclass of Preproteins. Molecular Biology of the Cell, 2006, 17(3): 1436-1450. DOI 10.1091/mbc.E05-08-0740
  9. Grosse-Coosmann, F., Boehm, A. M., Sickmann, A., Efficient Analysis and Extraction of MS/MS Result Data from Mascot(TM) Result Files. BMC Bioinformatics, 2005. 6(290). DOI 10.1186/1471-2105-6-290
  10. Boehm, A. M., Galvin, R. P., Sickmann, A., Extractor for ESI Quadrupole TOF Tandem MS Data Enabled for High Throughput Batch Processing. BMC Bioinformatics, 2004. 5(162). DOI 10.1186/1471-2105-5-162
  11. Boehm, A. M., Grosse-Coosmann, F., Sickmann, A., Command Line Tool for Calculating Theoretical MS Spectra for Given Sequences. Bioinformatics, 2004. 20(16): 2889-2891. DOI 10.1093/bioinformatics/bth328
  12. Bernhardt, P., Wilke, H.-J., Wenger, K. H., Jungkunz, B., Böhm, A., Claes, L. E., Multiple muscle force simulation in axial rotation of the cervical spine, Clinical Biomechanics, 14 (1), Januar, 1999: 32-40. DOI 10.1016/S0268-0033(98)00031-X
  13. Böhm, A. M., Jungkunz, B., Bending Stiffness of Healing Fractures Can Be Calculated from Quantitative Computed Tomography. European Journal of Radiology, 1999. 30(1): 28-32. DOI 10.1016/S0720-048X(98)00138-7
  14. Böhm, A., Privacy Protection in Germany: Regulations and Methods. ACM SIGCAS Computers and Society, 1998. 28(3): 25-27. DOI 10.1145/298972.298985
  15. Böhm, A., Kongehl, G., Datenschutz- und Datensicherheitskonzept für die Telemetropole Ulm/ Ostwürttemberg / Oberschwaben, DuD, Datenschutz und Datensicherheit - Recht und Sicherheit in Informationsverarbeitung und Kommunikation, Heft 12/Dezember 1996: 716-722

Selected Journal Articles

  1. Höpfner, H., Schallehn, E., Böhm, A. M., Workshop-Bericht zum "18. Workschop Grundlagen von Datenbanken", Datenbank-Spektrum, issue 18, August 2006: 60-61.
  2. Jungkunz, B., Böhm, A. M., Der C-64 in der Berufsausbildung. GO64!, 2002(2): 8-9.
  3. Böhm, A. M., Der Ramlink-Manager, GO64!, 2001(10): 10-11, A description of this software is available here.
  4. Böhm, A. M., Hausmann, M., Datenbanken in der Softwareentwicklung, Unix Open, Heft 11/November, 1999: 30-32
  5. Böhm, A., Datenschutz bei Invivo- und Invitro-Tests, Datenschutznachrichten, 4/1997: 8 ff.

Selected Meeting Presentations

  1. Seipel, D., Fröhlich, M., Boehm, A. M., JSquash: Source Code Analysis of Embedded Database Applications for Determining SQL Statements, 18th International Conference on Applications of Declarative Programming and Knowledge Management (INAP 2009), November 5.-7. 2009, Evora, Portugal
  2. Pütz, S., Böhm, A., Stiewe, T., Sickmann, A., iTRAQ-Analysis of a Cell Culture Model for Malignant Transformation, 7th HUPO Annual World Congress (HUPO 2008), August, 16.-20. 2008, Amsterdam, The Netherlands
  3. Boehm, A. M., Seipel, D., Sickmann, A., Wetzka, M. Squash: A Tool for Designing, Analyzing and Refactoring Relational Database Applications, International Conference on Applications of Declarative Programming and Knowledge Management / Workshop on (Constraint) Logic Programming (INAP / WLP 2007), October, 4.-6. 2007, Würzburg, Germany
  4. Boehm, A. M., Wetzka, M., Sickmann, A., Seipel, D. A Tool for Analyzing and Tuning Relational Database Systems: SQUASH, 18. Workshop über Grundlagen von Datenbanken (GvD 2006), June, 6.-9. 2006, Wittenberg, Sachsen-Anhalt, Germany, extended Abstract